IQ-TREE multicore version 1.6.12 for Linux 64-bit built Aug 15 2019
Developed by Bui Quang Minh, Nguyen Lam Tung, Olga Chernomor,
Heiko Schmidt, Dominik Schrempf, Michael Woodhams.

Host:    rabi (SSE4.2, 15 GB RAM)
Command: ../../iqtree -s Pettalidae_18S_mafft.fasta -m TESTNEW -bb 1000 -alrt 1000
Seed:    379919 (Using SPRNG - Scalable Parallel Random Number Generator)
Time:    Wed Jun 15 22:54:34 2022
Kernel:  SSE2 - 1 threads (24 CPU cores detected)

HINT: Use -nt option to specify number of threads because your CPU has 24 cores!
HINT: -nt AUTO will automatically determine the best number of threads to use.

Reading alignment file Pettalidae_18S_mafft.fasta ... Fasta format detected
Alignment most likely contains DNA/RNA sequences
Alignment has 123 sequences with 1763 columns, 220 distinct patterns
66 parsimony-informative, 132 singleton sites, 1565 constant sites
                                             Gap/Ambiguity  Composition  p-value
   1  Limulus_polyphemus                             0.23%    passed     97.78%
   2  Metasiro_savannahensis_MCZ-134557              1.02%    passed     99.57%
   3  Cyphophthalmus_duricorius_MCZ-135009           0.00%    passed     99.84%
   4  Parasiro_coiffaiti_MCZ-132372                  0.06%    passed     99.39%
   5  Parasiro_minor_MCZ-132374                      0.06%    passed     99.39%
   6  Paramiopsalis_ramulosus_MCZ-135006             0.06%    passed     99.75%
   7  Siro_rubens_MCZ-132391                         0.34%    passed     99.75%
   8  Siro_exilis_MCZ-134551                         0.06%    passed     98.43%
   9  Suzukielus_sauteri_MCZ-132256                  0.06%    passed     92.88%
  10  Aoraki_westlandica_MCZ-134653                  1.19%    passed     99.84%
  11  Aoraki_crypta_MCZ-101289                       0.06%    passed     99.99%
  12  Aoraki_denticulata_denticulata_MCZ-134642      3.91%    passed     99.14%
  13  Aoraki_denticulata_denticulata_MCZ-134647_1    0.06%    passed     99.97%
  14  Aoraki_denticulata_denticulata_MCZ-134639_1    0.06%    passed     99.98%
  15  Aoraki_denticulata_denticulata_MCZ-134646      0.06%    passed     99.97%
  16  Aoraki_denticulata_major_MCZ-35669             0.06%    passed     99.97%
  17  Aoraki_denticulata_major_MCZ-134644            0.23%    passed     99.89%
  18  Aoraki_grandis_MCZ-134652                      0.06%    passed     99.99%
  19  Aoraki_granulosa_MCZ-134675                    1.87%    passed     99.72%
  20  Aoraki_granulosa_MCZ-134684                    0.06%    passed     99.97%
  21  Aoraki_healyi_MCZ-134638                       0.06%    passed     99.99%
  22  Aoraki_inerma_MCZ-134648                       0.06%    passed     99.99%
  23  Aoraki_longitarsa_MCZ-35659                    0.06%    passed     99.97%
  24  Aoraki_longitarsa_MCZ-35660                    0.06%    passed     99.97%
  25  Aoraki_longitarsa_MCZ-1346566_1                0.11%    passed     99.90%
  26  Aoraki_longitarsa_MCZ-134656_2                 0.06%    passed     99.97%
  27  Aoraki_longitarsa_CMNZ                         0.06%    passed     99.97%
  28  Aoraki_tumidata_MCZ-133838                     0.06%    passed     99.99%
  29  Aoraki_cf_tumidata_DOC094                      0.11%    passed     99.98%
  30  Archaeopurcellia_eureka_MCZ-162243             0.40%    passed     99.99%
  31  Archaeopurcellia_eureka_MCZ-162249             0.40%    passed     99.99%
  32  Austropurcellia_acuta_MCZ-134701               0.06%    passed     99.91%
  33  Austropurcellia_arcticosa_MCZ-132325          26.21%    passed     74.47%
  34  Austropurcellia_cadens_CASENT9035046           2.38%    passed     99.07%
  35  Austropurcellia_clousei_MCZ-132339             4.31%    passed     97.71%
  36  Austropurcellia_culminis_MCZ-132322            3.40%    passed     98.84%
  37  Austropurcellia_daviesae_MCZ-132323            2.38%    passed     99.07%
  38  Austropurcellia_despectata_MCZ-132324          2.38%    passed     99.07%
  39  Austropurcellia_giribeti_MCZ-132337            0.06%    passed     99.97%
  40  Austropurcellia_giribeti_MCZ-134696            0.06%    passed     99.97%
  41  Austropurcellia_scoparia_MCZ-134700            1.42%    passed     99.94%
  42  Austropurcellia_sharmai_MCZ-134698             0.06%    passed     99.92%
  43  Austropurcellia_tholei_MCZ-134697              0.06%    passed     99.97%
  44  Austropurcellia_vicina_MCZ-132318              3.29%    passed     97.77%
  45  Austropurcellia_vicina_MCZ-132334              0.06%    passed     99.87%
  46  Chileogovea_jocasta_MCZ-134713                 0.06%    passed     99.89%
  47  Chileogovea_jocasta_MCZ-134714                 0.06%    passed     99.97%
  48  Chileogovea_jocasta_MCZ-134715                 0.17%    passed     99.94%
  49  Chileogovea_oedipus_MCZ-134709                 0.06%    passed     99.97%
  50  Chileogovea_oedipus_MCZ-134710                 0.06%    passed    100.00%
  51  Chileogovea_oedipus_MCZ-134711                 0.06%    passed    100.00%
  52  Chileogovea_oedipus_MCZ-134712                 0.06%    passed     99.97%
  53  Karripurcellia_harveyi_MCZ-132345              0.06%    passed     99.04%
  54  Karripurcellia_peckorum_MCZ-134719             0.11%    passed     99.48%
  55  Karripurcellia_peckorum_MCZ-134720             0.06%    passed     99.04%
  56  Karripurcellia_peckorum_MCZ-134721             0.06%    passed     99.04%
  57  Karripurcellia_peckorum_MCZ-134725             0.06%    passed     99.04%
  58  Karripurcellia_peckorum_MCZ-134726             0.06%    passed     99.90%
  59  Neopurcellia_salmoni_MCZ-29317                 0.11%    passed     99.97%
  60  Neopurcellia_salmoni_MCZ-134739                0.06%    passed     99.94%
  61  Neopurcellia_salmoni_MCZ-134741                0.06%    passed     99.94%
  62  Parapurcellia_amatola_MCZ-133841               0.06%    passed     99.99%
  63  Parapurcellia_convexa_MCZ-134744               0.06%    passed     99.93%
  64  Parapurcellia_convexa_MCZ-128902               0.06%    passed     99.93%
  65  Parapurcellia_fissa_MCZ-134745                 0.06%    passed     99.98%
  66  Parapurcellia_minuta_MCZ-134747                0.06%    passed     99.98%
  67  Parapurcellia_monticola_MCZ-60357_1            0.06%    passed     99.93%
  68  Parapurcellia_monticola_MCZ-60357_2            0.06%    passed     99.93%
  69  Parapurcellia_monticola_MCZ-134751             0.06%    passed     99.89%
  70  Parapurcellia_peregrinator_MCZ-128901          0.06%    passed     99.79%
  71  Parapurcellia_rumpiana_MCZ-134748              0.06%    passed     99.98%
  72  Parapurcellia_silvicola_MCZ-134742_1           0.11%    passed     99.95%
  73  Parapurcellia_silvicola_MCZ-134742_2           0.06%    passed     99.93%
  74  Parapurcellia_staregai_MCZ-134746              0.06%    passed     99.98%
  75  Purcellia_sp_MCZ-128897                        0.06%    passed     99.98%
  76  Parapurcellia_nsp_Limpopo_MCZ-128900          26.21%    passed     76.40%
  77  Pettalus_thwaitesi_DNA101223                   0.06%    passed     99.92%
  78  Pettalus_sp_MCZ-132353                         0.06%    passed     99.93%
  79  Pettalus_sp_MCZ-132354                         0.06%    passed     99.98%
  80  Pettalus_sp_MCZ-132356                         0.06%    passed     99.92%
  81  Pettalus_sp_MCZ-132357                         0.06%    passed     99.98%
  82  Pettalus_sp_MCZ-132359                         0.06%    passed     99.92%
  83  Pettalus_sp_MCZ-132360                         0.06%    passed     99.98%
  84  Pettalus_sp_MCZ-134967                         0.06%    passed     99.86%
  85  Purcellia_argasiformis_MCZ-134759              0.06%    passed     99.98%
  86  Purcellia_argasiformis_MCZ-134762              0.06%    passed     99.98%
  87  Purcellia_griswoldi_MCZ-128898                 0.06%    passed     99.98%
  88  Purcellia_griswoldi_MCZ-134756                 0.06%    passed     99.98%
  89  Purcellia_illustrans_MCZ-60635                 0.06%    passed     99.98%
  90  Purcellia_illustrans_MCZ-128896                0.06%    passed     99.98%
  91  Purcellia_illustrans_MCZ-134753                0.06%    passed     99.98%
  92  Purcellia_illustrans_MCZ-134754                0.06%    passed     99.96%
  93  Purcellia_leleupi_MCZ-129098                   0.06%    passed     99.98%
  94  Purcellia_sp_129493                            0.06%    passed     99.98%
  95  Purcellia_sp_129494                            0.06%    passed    100.00%
  96  Rakaia_antipodiana_MCZ-134580                  0.17%    passed     99.95%
  97  Rakaia_australis_MCZ-134592                    0.06%    passed     99.89%
  98  Rakaia_collaris_MCZ-134574                     1.42%    passed     99.92%
  99  Rakaia_digitata_MCZ-134571                     0.11%    passed     99.97%
 100  Rakaia_dorothea_MCZ-134577                     0.06%    passed     99.95%
 101  Rakaia_florensis_MCZ-134588                    0.06%    passed     99.99%
 102  Rakaia_lindsayi_MCZ-134598                     0.06%    passed     99.98%
 103  Rakaia_macra_MCZ-134582                        0.79%    passed     99.65%
 104  Rakaia_media_MCZ-134581                        0.06%    passed     99.68%
 105  Rakaia_media_MCZ-134605                        0.06%    passed     99.40%
 106  Rakaia_minutissima_MCZ-29280                  26.04%    passed     79.43%
 107  Rakaia_minutissima_MCZ-134591                  0.06%    passed     99.99%
 108  Rakaia_pauli_MCZ-134576                        0.06%    passed     99.95%
 109  Rakaia_solitaria_MCZ-134585                    0.06%    passed     99.88%
 110  Rakaia_sorenseni_MCZ-134567                    0.06%    passed     99.96%
 111  Rakaia_stewartiensis_MCZ-134599                0.06%    passed     99.98%
 112  Rakaia_uniloca_MCZ-134583                      0.06%    passed    100.00%
 113  Rakaia_uniloca_MCZ-134600                      0.06%    passed     99.89%
 114  Rakaia_sp_MCZ-35662                            0.06%    passed     99.96%
 115  Rakaia_sp_MCZ-35668                            0.06%    passed     99.95%
 116  Rakaia_sp_MCZ-100753                           0.06%    passed     99.40%
 117  Rakaia_sp_MCZ-129612                           0.06%    passed     99.95%
 118  Rakaia_sp_MCZ-129614                           0.06%    passed     99.87%
 119  Rakaia_sp_MCZ-133847                           0.06%    passed     99.95%
 120  Rakaia_sp_MCZ-133849                           0.06%    passed     99.47%
 121  Rakaia_sp_MCZ-134568                           0.17%    passed     99.97%
 122  Rakaia_sp_MCZ-134575                           2.67%    passed     98.66%
 123  Rakaia_sp_MCZ-134584                           0.06%    passed     99.95%
****  TOTAL                                          0.97%  0 sequences failed composition chi2 test (p-value<5%; df=3)
NOTE: Aoraki_grandis_MCZ-134652 is identical to Aoraki_crypta_MCZ-101289 but kept for subsequent analysis
NOTE: Aoraki_denticulata_denticulata_MCZ-134646 is identical to Aoraki_denticulata_denticulata_MCZ-134647_1 but kept for subsequent analysis
NOTE: Archaeopurcellia_eureka_MCZ-162249 is identical to Archaeopurcellia_eureka_MCZ-162243 but kept for subsequent analysis
NOTE: Austropurcellia_daviesae_MCZ-132323 is identical to Austropurcellia_cadens_CASENT9035046 but kept for subsequent analysis
NOTE: Austropurcellia_giribeti_MCZ-134696 is identical to Austropurcellia_giribeti_MCZ-132337 but kept for subsequent analysis
NOTE: Chileogovea_oedipus_MCZ-134709 is identical to Chileogovea_jocasta_MCZ-134714 but kept for subsequent analysis
NOTE: Chileogovea_oedipus_MCZ-134711 is identical to Chileogovea_oedipus_MCZ-134710 but kept for subsequent analysis
NOTE: Karripurcellia_peckorum_MCZ-134720 is identical to Karripurcellia_harveyi_MCZ-132345 but kept for subsequent analysis
NOTE: Neopurcellia_salmoni_MCZ-134741 is identical to Neopurcellia_salmoni_MCZ-134739 but kept for subsequent analysis
NOTE: Parapurcellia_convexa_MCZ-128902 is identical to Parapurcellia_convexa_MCZ-134744 but kept for subsequent analysis
NOTE: Parapurcellia_rumpiana_MCZ-134748 is identical to Parapurcellia_fissa_MCZ-134745 but kept for subsequent analysis
NOTE: Parapurcellia_staregai_MCZ-134746 is identical to Parapurcellia_minuta_MCZ-134747 but kept for subsequent analysis
NOTE: Purcellia_argasiformis_MCZ-134759 is identical to Purcellia_sp_MCZ-128897 but kept for subsequent analysis
NOTE: Pettalus_sp_MCZ-132356 is identical to Pettalus_thwaitesi_DNA101223 but kept for subsequent analysis
NOTE: Pettalus_sp_MCZ-132357 is identical to Pettalus_sp_MCZ-132354 but kept for subsequent analysis
NOTE: Rakaia_pauli_MCZ-134576 is identical to Rakaia_dorothea_MCZ-134577 but kept for subsequent analysis
NOTE: Rakaia_minutissima_MCZ-134591 is identical to Rakaia_florensis_MCZ-134588 but kept for subsequent analysis
NOTE: Rakaia_stewartiensis_MCZ-134599 is identical to Rakaia_lindsayi_MCZ-134598 but kept for subsequent analysis
NOTE: Rakaia_sp_MCZ-100753 is identical to Rakaia_media_MCZ-134605 but kept for subsequent analysis
NOTE: Rakaia_sp_MCZ-35662 is identical to Rakaia_sorenseni_MCZ-134567 but kept for subsequent analysis
NOTE: 28 identical sequences (see below) will be ignored for subsequent analysis
NOTE: Aoraki_healyi_MCZ-134638 (identical to Aoraki_crypta_MCZ-101289) is ignored but added at the end
NOTE: Aoraki_inerma_MCZ-134648 (identical to Aoraki_crypta_MCZ-101289) is ignored but added at the end
NOTE: Aoraki_tumidata_MCZ-133838 (identical to Aoraki_crypta_MCZ-101289) is ignored but added at the end
NOTE: Aoraki_denticulata_major_MCZ-35669 (identical to Aoraki_denticulata_denticulata_MCZ-134647_1) is ignored but added at the end
NOTE: Aoraki_longitarsa_MCZ-35659 (identical to Aoraki_denticulata_denticulata_MCZ-134647_1) is ignored but added at the end
NOTE: Aoraki_longitarsa_MCZ-35660 (identical to Aoraki_denticulata_denticulata_MCZ-134647_1) is ignored but added at the end
NOTE: Aoraki_longitarsa_MCZ-134656_2 (identical to Aoraki_denticulata_denticulata_MCZ-134647_1) is ignored but added at the end
NOTE: Aoraki_longitarsa_CMNZ (identical to Aoraki_denticulata_denticulata_MCZ-134647_1) is ignored but added at the end
NOTE: Austropurcellia_despectata_MCZ-132324 (identical to Austropurcellia_cadens_CASENT9035046) is ignored but added at the end
NOTE: Chileogovea_oedipus_MCZ-134712 (identical to Chileogovea_jocasta_MCZ-134714) is ignored but added at the end
NOTE: Karripurcellia_peckorum_MCZ-134721 (identical to Karripurcellia_harveyi_MCZ-132345) is ignored but added at the end
NOTE: Karripurcellia_peckorum_MCZ-134725 (identical to Karripurcellia_harveyi_MCZ-132345) is ignored but added at the end
NOTE: Parapurcellia_monticola_MCZ-60357_1 (identical to Parapurcellia_convexa_MCZ-134744) is ignored but added at the end
NOTE: Parapurcellia_monticola_MCZ-60357_2 (identical to Parapurcellia_convexa_MCZ-134744) is ignored but added at the end
NOTE: Parapurcellia_silvicola_MCZ-134742_2 (identical to Parapurcellia_convexa_MCZ-134744) is ignored but added at the end
NOTE: Purcellia_argasiformis_MCZ-134762 (identical to Purcellia_sp_MCZ-128897) is ignored but added at the end
NOTE: Purcellia_griswoldi_MCZ-128898 (identical to Purcellia_sp_MCZ-128897) is ignored but added at the end
NOTE: Purcellia_griswoldi_MCZ-134756 (identical to Purcellia_sp_MCZ-128897) is ignored but added at the end
NOTE: Purcellia_illustrans_MCZ-60635 (identical to Purcellia_sp_MCZ-128897) is ignored but added at the end
NOTE: Purcellia_illustrans_MCZ-128896 (identical to Purcellia_sp_MCZ-128897) is ignored but added at the end
NOTE: Purcellia_illustrans_MCZ-134753 (identical to Purcellia_sp_MCZ-128897) is ignored but added at the end
NOTE: Purcellia_leleupi_MCZ-129098 (identical to Purcellia_sp_MCZ-128897) is ignored but added at the end
NOTE: Purcellia_sp_129493 (identical to Purcellia_sp_MCZ-128897) is ignored but added at the end
NOTE: Pettalus_sp_MCZ-132360 (identical to Pettalus_sp_MCZ-132354) is ignored but added at the end
NOTE: Rakaia_sp_MCZ-35668 (identical to Rakaia_dorothea_MCZ-134577) is ignored but added at the end
NOTE: Rakaia_sp_MCZ-129612 (identical to Rakaia_dorothea_MCZ-134577) is ignored but added at the end
NOTE: Rakaia_sp_MCZ-133847 (identical to Rakaia_dorothea_MCZ-134577) is ignored but added at the end
NOTE: Rakaia_sp_MCZ-134584 (identical to Rakaia_dorothea_MCZ-134577) is ignored but added at the end

For your convenience alignment with unique sequences printed to Pettalidae_18S_mafft.fasta.uniqueseq.phy


Create initial parsimony tree by phylogenetic likelihood library (PLL)... 0.007 seconds
NOTE: ModelFinder requires 7 MB RAM!
ModelFinder will test 286 DNA models (sample size: 1763) ...
 No. Model         -LnL         df  AIC          AICc         BIC
  1  JC            4438.802     187 9251.604     9296.246     10275.386
  2  JC+I          4366.477     188 9108.953     9154.102     10138.210
  3  JC+G4         4368.543     188 9113.086     9158.235     10142.344
  4  JC+I+G4       4360.880     189 9099.760     9145.418     10134.492
  5  JC+R2         4343.359     189 9064.719     9110.377     10099.451
  6  JC+R3         4343.304     191 9068.607     9115.294     10114.289
 14  F81+F         4438.402     190 9256.803     9302.974     10297.010
 15  F81+F+I       4366.478     191 9114.957     9161.643     10160.638
 16  F81+F+G4      4368.464     191 9118.928     9165.614     10164.610
 17  F81+F+I+G4    4360.831     192 9105.662     9152.867     10156.818
 18  F81+F+R2      4343.549     192 9071.098     9118.303     10122.255
 19  F81+F+R3      4343.548     194 9075.096     9123.349     10137.202
 27  K2P           4393.147     188 9162.294     9207.442     10191.551
 28  K2P+I         4321.029     189 9020.057     9065.715     10054.789
 29  K2P+G4        4323.026     189 9024.052     9069.709     10058.783
 30  K2P+I+G4      4315.249     190 9010.498     9056.669     10050.705
 31  K2P+R2        4297.626     190 8975.253     9021.423     10015.460
 32  K2P+R3        4297.626     192 8979.252     9026.458     10030.409
 40  HKY+F         4393.210     191 9168.421     9215.107     10214.102
 41  HKY+F+I       4320.386     192 9024.772     9071.977     10075.928
 42  HKY+F+G4      4322.526     192 9029.052     9076.257     10080.209
 43  HKY+F+I+G4    4314.656     193 9015.313     9063.040     10071.944
 44  HKY+F+R2      4297.399     193 8980.797     9028.525     10037.428
 45  HKY+F+R3      4297.399     195 8984.798     9033.579     10052.378
 53  TNe           4374.972     189 9127.944     9173.602     10162.676
 54  TNe+I         4307.765     190 8995.529     9041.700     10035.736
 55  TNe+G4        4308.375     190 8996.750     9042.920     10036.956
 56  TNe+I+G4      4300.640     191 8983.279     9029.966     10028.961
 57  TNe+R2        4281.809     191 8945.619     8992.305     9991.300
 58  TNe+R3        4281.811     193 8949.621     8997.348     10006.252
 66  TN+F          4370.932     192 9125.864     9173.070     10177.021
 67  TN+F+I        4303.647     193 8993.294     9041.021     10049.925
 68  TN+F+G4       4304.181     193 8994.362     9042.089     10050.993
 69  TN+F+I+G4     4296.364     194 8980.729     9028.981     10042.835
 70  TN+F+R2       4277.649     194 8943.297     8991.550     10005.403
 71  TN+F+R3       4277.650     196 8947.300     8996.612     10020.355
 79  K3P           4393.031     189 9164.061     9209.719     10198.793
 80  K3P+I         4320.902     190 9021.805     9067.975     10062.012
 81  K3P+G4        4322.901     190 9025.803     9071.973     10066.010
 82  K3P+I+G4      4314.903     191 9011.806     9058.492     10057.487
 83  K3P+R2        4297.424     191 8976.847     9023.533     10022.529
 84  K3P+R3        4297.417     193 8980.834     9028.561     10037.465
 92  K3Pu+F        4393.093     192 9170.186     9217.391     10221.342
 93  K3Pu+F+I      4320.270     193 9026.539     9074.267     10083.170
 94  K3Pu+F+G4     4322.409     193 9030.819     9078.546     10087.450
 95  K3Pu+F+I+G4   4314.320     194 9016.641     9064.893     10078.747
 96  K3Pu+F+R2     4297.201     194 8982.403     9030.655     10044.509
 97  K3Pu+F+R3     4297.201     196 8986.403     9035.715     10059.458
105  TPM2+F        4392.940     192 9169.880     9217.085     10221.036
106  TPM2+F+I      4320.256     193 9026.512     9074.240     10083.143
107  TPM2+F+G4     4322.373     193 9030.746     9078.473     10087.377
108  TPM2+F+I+G4   4314.255     194 9016.511     9064.763     10078.617
109  TPM2+F+R2     4297.081     194 8982.161     9030.414     10044.267
110  TPM2+F+R3     4297.080     196 8986.161     9035.474     10059.216
118  TPM2u+F       4392.940     192 9169.879     9217.084     10221.035
119  TPM2u+F+I     4320.255     193 9026.510     9074.237     10083.141
120  TPM2u+F+G4    4322.372     193 9030.744     9078.471     10087.375
121  TPM2u+F+I+G4  4314.218     194 9016.437     9064.689     10078.543
122  TPM2u+F+R2    4297.080     194 8982.159     9030.412     10044.265
123  TPM2u+F+R3    4297.080     196 8986.159     9035.472     10059.214
131  TPM3+F        4393.005     192 9170.011     9217.216     10221.167
132  TPM3+F+I      4320.011     193 9026.022     9073.749     10082.653
133  TPM3+F+G4     4322.189     193 9030.378     9078.106     10087.009
134  TPM3+F+I+G4   4313.962     194 9015.923     9064.176     10078.029
135  TPM3+F+R2     4297.072     194 8982.144     9030.396     10044.250
136  TPM3+F+R3     4297.072     196 8986.144     9035.457     10059.200
144  TPM3u+F       4393.005     192 9170.011     9217.216     10221.167
145  TPM3u+F+I     4320.011     193 9026.022     9073.750     10082.654
146  TPM3u+F+G4    4322.185     193 9030.369     9078.097     10087.001
147  TPM3u+F+I+G4  4313.927     194 9015.853     9064.106     10077.959
148  TPM3u+F+R2    4297.072     194 8982.143     9030.396     10044.249
149  TPM3u+F+R3    4297.072     196 8986.143     9035.456     10059.199
157  TIMe          4374.848     190 9129.695     9175.866     10169.902
158  TIMe+I        4307.627     191 8997.254     9043.941     10042.936
159  TIMe+G4       4308.238     191 8998.476     9045.162     10044.157
160  TIMe+I+G4     4300.169     192 8984.338     9031.543     10035.494
161  TIMe+R2       4281.614     192 8947.228     8994.433     9998.384
162  TIMe+R3       4281.614     194 8951.228     8999.481     10013.334
170  TIM+F         4370.814     193 9127.628     9175.355     10184.259
171  TIM+F+I       4303.528     194 8995.057     9043.309     10057.163
172  TIM+F+G4      4304.059     194 8996.118     9044.371     10058.224
173  TIM+F+I+G4    4295.917     195 8981.835     9030.616     10049.415
174  TIM+F+R2      4277.469     195 8944.938     8993.720     10012.519
175  TIM+F+R3      4277.469     197 8948.937     8998.785     10027.467
183  TIM2e         4374.585     190 9129.170     9175.340     10169.376
184  TIM2e+I       4307.527     191 8997.053     9043.740     10042.735
185  TIM2e+G4      4308.110     191 8998.220     9044.906     10043.901
186  TIM2e+I+G4    4300.014     192 8984.029     9031.234     10035.185
187  TIM2e+R2      4281.408     192 8946.817     8994.022     9997.973
188  TIM2e+R3      4281.407     194 8950.814     8999.067     10012.920
196  TIM2+F        4370.672     193 9127.344     9175.071     10183.975
197  TIM2+F+I      4303.516     194 8995.032     9043.285     10057.138
198  TIM2+F+G4     4304.028     194 8996.056     9044.308     10058.162
199  TIM2+F+I+G4   4295.851     195 8981.701     9030.482     10049.282
200  TIM2+F+R2     4277.412     195 8944.824     8993.605     10012.405
201  TIM2+F+R3     4277.412     197 8948.824     8998.672     10027.354
209  TIM3e         4374.890     190 9129.780     9175.951     10169.987
210  TIM3e+I       4307.581     191 8997.162     9043.849     10042.844
211  TIM3e+G4      4308.212     191 8998.423     9045.110     10044.105
212  TIM3e+I+G4    4300.031     192 8984.062     9031.267     10035.218
213  TIM3e+R2      4281.696     192 8947.391     8994.596     9998.548
214  TIM3e+R3      4281.695     194 8951.390     8999.642     10013.496
222  TIM3+F        4370.725     193 9127.451     9175.178     10184.082
223  TIM3+F+I      4303.243     194 8994.486     9042.738     10056.592
224  TIM3+F+G4     4303.802     194 8995.604     9043.857     10057.710
225  TIM3+F+I+G4   4295.514     195 8981.029     9029.810     10048.609
226  TIM3+F+R2     4277.345     195 8944.691     8993.472     10012.271
227  TIM3+F+R3     4277.346     197 8948.693     8998.541     10027.223
235  TVMe          4392.519     191 9167.038     9213.724     10212.719
236  TVMe+I        4320.410     192 9024.819     9072.024     10075.976
237  TVMe+G4       4322.410     192 9028.820     9076.025     10079.976
238  TVMe+I+G4     4313.914     193 9013.828     9061.555     10070.459
239  TVMe+R2       4296.738     193 8979.476     9027.203     10036.107
240  TVMe+R3       4296.730     195 8983.460     9032.241     10051.041
248  TVM+F         4392.590     194 9173.180     9221.432     10235.286
249  TVM+F+I       4319.709     195 9029.419     9078.200     10096.999
250  TVM+F+G4      4321.872     195 9033.744     9082.525     10101.324
251  TVM+F+I+G4    4313.265     196 9018.531     9067.844     10091.586
252  TVM+F+R2      4296.510     196 8985.020     9034.333     10058.076
253  TVM+F+R3      4296.510     198 8989.020     9039.406     10073.025
261  SYM           4374.353     192 9132.705     9179.911     10183.862
262  SYM+I         4307.160     193 9000.320     9048.047     10056.951
263  SYM+G4        4307.771     193 9001.542     9049.269     10058.173
264  SYM+I+G4      4299.410     194 8986.820     9035.073     10048.926
265  SYM+R2        4281.069     194 8950.138     8998.390     10012.243
266  SYM+R3        4281.069     196 8954.139     9003.452     10027.194
274  GTR+F         4370.329     195 9130.657     9179.438     10198.238
275  GTR+F+I       4302.944     196 8997.888     9047.201     10070.943
276  GTR+F+G4      4303.490     196 8998.980     9048.293     10072.036
277  GTR+F+I+G4    4295.022     197 8984.044     9033.892     10062.574
278  GTR+F+R2      4276.893     197 8947.786     8997.634     10026.316
279  GTR+F+R3      4276.894     199 8951.788     9002.715     10041.267
Akaike Information Criterion:           TN+F+R2
Corrected Akaike Information Criterion: TN+F+R2
Bayesian Information Criterion:         TNe+R2
Best-fit model: TNe+R2 chosen according to BIC

All model information printed to Pettalidae_18S_mafft.fasta.model.gz
CPU time for ModelFinder: 9.636 seconds (0h:0m:9s)
Wall-clock time for ModelFinder: 9.990 seconds (0h:0m:9s)
Generating 1000 samples for ultrafast bootstrap (seed: 379919)...

NOTE: 2 MB RAM (0 GB) is required!
Estimate model parameters (epsilon = 0.100)
1. Initial log-likelihood: -4413.626
2. Current log-likelihood: -4344.836
3. Current log-likelihood: -4342.313
4. Current log-likelihood: -4339.615
5. Current log-likelihood: -4336.729
6. Current log-likelihood: -4333.915
7. Current log-likelihood: -4331.149
8. Current log-likelihood: -4328.220
9. Current log-likelihood: -4325.097
10. Current log-likelihood: -4321.834
11. Current log-likelihood: -4318.439
12. Current log-likelihood: -4314.969
13. Current log-likelihood: -4311.499
14. Current log-likelihood: -4308.212
15. Current log-likelihood: -4305.258
16. Current log-likelihood: -4302.705
17. Current log-likelihood: -4300.552
18. Current log-likelihood: -4298.753
19. Current log-likelihood: -4297.140
20. Current log-likelihood: -4295.527
21. Current log-likelihood: -4293.800
22. Current log-likelihood: -4291.922
23. Current log-likelihood: -4289.922
24. Current log-likelihood: -4287.869
25. Current log-likelihood: -4285.899
26. Current log-likelihood: -4284.221
27. Current log-likelihood: -4282.973
28. Current log-likelihood: -4282.191
29. Current log-likelihood: -4281.954
30. Current log-likelihood: -4281.822
Optimal log-likelihood: -4281.755
Rate parameters:  A-C: 1.00000  A-G: 1.82347  A-T: 1.00000  C-G: 1.00000  C-T: 5.25628  G-T: 1.00000
Base frequencies:  A: 0.250  C: 0.250  G: 0.250  T: 0.250
Site proportion and rates:  (0.970,0.550) (0.030,15.746)
Parameters optimization took 30 rounds (1.138 sec)
Computing ML distances based on estimated model parameters... 0.042 sec
Computing BIONJ tree...
0.053 seconds
Log-likelihood of BIONJ tree: -4273.945
--------------------------------------------------------------------
|             INITIALIZING CANDIDATE TREE SET                      |
--------------------------------------------------------------------
Generating 98 parsimony trees... 0.647 second
Computing log-likelihood of 98 initial trees ... 1.328 seconds
Current best score: -4267.578

Do NNI search on 20 best initial trees
Estimate model parameters (epsilon = 0.100)
BETTER TREE FOUND at iteration 1: -4264.291
Iteration 10 / LogL: -4267.125 / Time: 0h:0m:5s
Iteration 20 / LogL: -4270.661 / Time: 0h:0m:8s
Finish initializing candidate tree set (20)
Current best tree score: -4264.291 / CPU time: 7.172
Number of iterations: 20
--------------------------------------------------------------------
|               OPTIMIZING CANDIDATE TREE SET                      |
--------------------------------------------------------------------
BETTER TREE FOUND at iteration 25: -4264.289
Iteration 30 / LogL: -4265.478 / Time: 0h:0m:11s (0h:0m:38s left)
Estimate model parameters (epsilon = 0.100)
BETTER TREE FOUND at iteration 38: -4263.858
Iteration 40 / LogL: -4279.635 / Time: 0h:0m:14s (0h:0m:37s left)
Estimate model parameters (epsilon = 0.100)
BETTER TREE FOUND at iteration 46: -4263.780
Iteration 50 / LogL: -4264.398 / Time: 0h:0m:17s (0h:0m:34s left)
Log-likelihood cutoff on original alignment: -4296.482
Iteration 60 / LogL: -4265.914 / Time: 0h:0m:20s (0h:0m:30s left)
Iteration 70 / LogL: -4264.488 / Time: 0h:0m:23s (0h:0m:26s left)
Iteration 80 / LogL: -4263.800 / Time: 0h:0m:26s (0h:0m:22s left)
Iteration 90 / LogL: -4263.797 / Time: 0h:0m:29s (0h:0m:18s left)
Iteration 100 / LogL: -4266.736 / Time: 0h:0m:32s (0h:0m:14s left)
Log-likelihood cutoff on original alignment: -4295.267
NOTE: Bootstrap correlation coefficient of split occurrence frequencies: 0.993
Iteration 110 / LogL: -4263.810 / Time: 0h:0m:35s (0h:0m:29s left)
Iteration 120 / LogL: -4264.491 / Time: 0h:0m:38s (0h:0m:25s left)
Iteration 130 / LogL: -4282.607 / Time: 0h:0m:41s (0h:0m:22s left)
Iteration 140 / LogL: -4264.854 / Time: 0h:0m:44s (0h:0m:19s left)
TREE SEARCH COMPLETED AFTER 147 ITERATIONS / Time: 0h:0m:46s

--------------------------------------------------------------------
|                    FINALIZING TREE SEARCH                        |
--------------------------------------------------------------------
Performs final model parameters optimization
Estimate model parameters (epsilon = 0.010)
1. Initial log-likelihood: -4263.780
Optimal log-likelihood: -4263.779
Rate parameters:  A-C: 1.00000  A-G: 1.77202  A-T: 1.00000  C-G: 1.00000  C-T: 5.29177  G-T: 1.00000
Base frequencies:  A: 0.250  C: 0.250  G: 0.250  T: 0.250
Site proportion and rates:  (0.975,0.589) (0.025,16.877)
Parameters optimization took 1 rounds (0.026 sec)
BEST SCORE FOUND : -4263.779

Testing tree branches by SH-like aLRT with 1000 replicates...
1.514 sec.
Creating bootstrap support values...
Split supports printed to NEXUS file Pettalidae_18S_mafft.fasta.splits.nex
Total tree length: 0.177

Total number of iterations: 147
CPU time used for tree search: 44.453 sec (0h:0m:44s)
Wall-clock time used for tree search: 44.792 sec (0h:0m:44s)
Total CPU time used: 47.501 sec (0h:0m:47s)
Total wall-clock time used: 48.112 sec (0h:0m:48s)

Computing bootstrap consensus tree...
Reading input file Pettalidae_18S_mafft.fasta.splits.nex...
95 taxa and 1363 splits.
Consensus tree written to Pettalidae_18S_mafft.fasta.contree
Reading input trees file Pettalidae_18S_mafft.fasta.contree
Log-likelihood of consensus tree: -4263.857

Analysis results written to: 
  IQ-TREE report:                Pettalidae_18S_mafft.fasta.iqtree
  Maximum-likelihood tree:       Pettalidae_18S_mafft.fasta.treefile
  Likelihood distances:          Pettalidae_18S_mafft.fasta.mldist

Ultrafast bootstrap approximation results written to:
  Split support values:          Pettalidae_18S_mafft.fasta.splits.nex
  Consensus tree:                Pettalidae_18S_mafft.fasta.contree
  Screen log file:               Pettalidae_18S_mafft.fasta.log

Date and Time: Wed Jun 15 22:55:33 2022
